genewise output
Score 85.39 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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SPP00000658_2.0   14 GYEPRFQELKREICGNCPDAEVSGFVGRR                     
                     GYEPR++EL   +    PDAEVSGFVGRR                     
                     GYEPRYRELAHVVKDEFPDAEVSGFVGRR                     
OMLM01020360.1-50303 gtgcctcgcgcggaggtcggggtgtggaa                     
                     gaacgagatcattaaatcacatcgttggg                     
                     acacctggctccggcgtttgagtccgaaa                     


SPP00000658_2.0   43                           CFEIQINDFLVFSKLESGGFPYS 
                                                FEI+IN  L+FSKLE+GGFPY  
                               G:S[agc]        SFEIEINGQLIFSKLETGGFPYE 
OMLM01020360.1-50216 AGTAAGTA  Intron 1   CAGGCatgagaagccattacgaggtctg 
                      <1-----[50215:50080]-1>  gtatatagatttcatacggtcaa 
                                               ctgaactggccccgtgttctatg 


SPP00000658_2.0   67 ED                       IIEAVVKAKDGKP-EKITRNRKEC 
                     +D                       I+ A+ +A DGKP  KIT+ R  C 
                     DD                       ILNAIQQAHDGKPVPKITKARAPC 
OMLM01020360.1-50008 ggGTGAGTA  Intron 2   CAGatagaccgcggacgcaaaagcgct 
                     aa<0-----[50002:49858]-0>ttactaacaagactcatcacgccg 
                     tc                       cgcatggttcgatgggccactaac 


SPP00000658_2.0   92 IIL                                               
                     +I+                                               
                     VIM                                               
OMLM01020360.1-49785 gaa                                               
                     ttt                                               
                     ctg                                               


//
Making a S in phase 1 intron
>OMLM01020360.1:subseq(13508,58205).pep
GYEPRYRELAHVVKDEFPDAEVSGFVGRRSSFEIEINGQLIFSKLETGGFPYEDDILNAI
QQAHDGKPVPKITKARAPCVIM
//
>OMLM01020360.1:subseq(13508,58205).[50303:49775].sp
GGATACGAACCCCGCTATCGGGAGCTCGCTCACGTCGTGAAGGACGAGTTTCCTGATGCG
GAAGTGTCTGGCTTCGTGGGAAGAAGAAGCAGCTTTGAGATAGAAATCAATGGGCAGCTC
ATCTTCTCCAAGCTTGAGACTGGTGGCTTTCCATATGAGGATGACATCTTGAACGCAATT
CAGCAGGCTCATGACGGGAAACCTGTGCCGAAGATCACCAAAGCCCGTGCACCATGCGTC
ATTATG
//
OMLM01020360.1:subseq(13508,58205)	GeneWise	match	50303	49777	85.39	-	.	OMLM01020360.1:subseq(13508,58205)-genewise-prediction-1
OMLM01020360.1:subseq(13508,58205)	GeneWise	cds	50303	50216	0.00	-	0	OMLM01020360.1:subseq(13508,58205)-genewise-prediction-1
OMLM01020360.1:subseq(13508,58205)	GeneWise	intron	50215	50080	0.00	-	.	OMLM01020360.1:subseq(13508,58205)-genewise-prediction-1
OMLM01020360.1:subseq(13508,58205)	GeneWise	cds	50079	50003	0.00	-	2	OMLM01020360.1:subseq(13508,58205)-genewise-prediction-1
OMLM01020360.1:subseq(13508,58205)	GeneWise	intron	50002	49858	0.00	-	.	OMLM01020360.1:subseq(13508,58205)-genewise-prediction-1
OMLM01020360.1:subseq(13508,58205)	GeneWise	cds	49857	49777	0.00	-	0	OMLM01020360.1:subseq(13508,58205)-genewise-prediction-1
//